The Dendrogrammer Code Documentation

The Dendrogrammer

This is the JavaScript documentation for The Dendrogrammer, a cross-browser interactive dendrogram creation tool designed to allow analysis of single linkage clustering output from MATLAB.

Choose "dendrogrammer" under the "Modules" heading on the left, or any class name from the "Classes" list for more information. See also the class diagram below. Additionally, below on this page, is a description of the elements in the application and how data is loaded into the application.

The PHP code

To see a text file of the PHP code click here. In the diagrams below you will find a diagram illustrating the role played by the PHP code. This PHP code file also contains HTML which defines the user interface elements for for the buttons and tabs which use jQuery.

JavaScript Class Dependencies

The diagram below shows the Dendrogrammer class dependencies with multiplicities. The arrows indicate that a class knows about another class. i.e. it is passed a reference to an instance of the pointed to class in its constructor parameters or at some point it makes use of that class.

The number 1 indicates that there is only one instance of the class in existence at any given time.

0..* indicates the there will be multiple instances of that class.

The application files

How data is loaded