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Research and Summer Schools, Workshops
K. Painter, M. Ptashnyk
Fourth Scottish Partial Differential Equation Colloquium,
University of Dundee, June 9–10, 2016
I. Kyza, M. Ptashnyk
Minisymposia
Numerical Analysis meets Mathematical Biology
I. Kyza, M. Ptashnyk
Transport processes in biology: modelling and analysis
J. Farkas, M. Ptashnyk
Minisymposia at ECMTB 2011, 2014, 2016, 2018
A multiscale approach to ‘Growth and Form’
M. Ptashnyk, C. Venkataraman
Plant models
L. Dupuy, M. Ptashnyk
Operators in Biology
J. Farkas M. Ptashnyk, G. Webb
The Physics of Plants
L. Dupuy, M. Ptashnyk
Part A: Microscale modelling of plant growth
- Rosemary Dyson (University of Birmingham, UK)
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Multiscale Modelling of Plant Root Growth
- Joelle De Caluwe (Universite Libre de Bruxelles, Belgium)
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A molecular model of entrainment for the plant circadian clock
- Leah Band (University of Nottingham, UK)
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Multiscale modeling reveals how gibberellin regulates plant growth under stressed conditions
- Bandan Chakrabortty (Wageningen UR, Netherlands)
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The role of cell shape/geometry in controlling cortical microtubule (CMT) self-organisation on plant cell cortex
Part B: Organisms and systems
- Mahmoud Fakih
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Development of a discrete element method to estimate the Force distributions probed by a growing root in a granular soil
- Bruno Moulia (INRIA, UMR PIAF, France)
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Modeling the driving of the active tropic motion of aerial plant organs
- Evelyne Kolb (PMMH, UMR, ESPCI ParisTech, France)
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Root growth inside a pore
- Wendy Silk (University of California at Davis, US)
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Curved and Twisted Biological Forms
A. Chavarria-Krauser, L. Dupuy, M. Ptashnyk
Part I: New theories and approaches to model plant systems
- Christophe Godin (INRIA, France)
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Modeling the mechanical regulation of morphogenesis in plants
- Eva Deinum (FOM Institute, Netherland)
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Understanding the paradoxical effects of katanin microtuble severing on the self-organisation of the plant cortical array
- Brian Seguin (University of Dundee, UK)
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Modeling a Plant Cell Wall: interactions between mechanics and biochemistry
- Stan Maree (The John Innes Centre, UK)
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At the crossroads: how auxin biases positioning of asymmetric cell divisions in the root meristem
- Juliane Claus (Heidelberg University, Germany)
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Modeling of Zinc Uptake and Transport in Plant Roots
- Betina Greese (Lund University, Sweden)
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Computational Modelling of Planar Cell Polarity in the Arabidopsis Root Epidermis
- Betina Greese (Lund University, Sweden)
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Computational Modelling of Planar Cell Polarity in the Arabidopsis Root Epidermis
- Henrik Jönsson (Lund University / The Sainsbury Lab, Sweden / UK)
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Understanding plant shoot development - a Computational Morphodynamics approach
Part II: From bio-imaging to analysis and modelling
- Richard Smith (Max Planck Institute, Germany)
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The effect of geometry on morphogenesis in the Arabidopsis embryo
- Dimitris Kalogiros (The James Hutton Institute /University of Dundee, UK)
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Density-based approaches to interface models and data in root biology
- Sam Keyes (University of Southampton, UK)
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Image-based plant phosphate uptake modelling: a case study for root hairs using synchrotron X-ray CT imaging
Part III: Models of interactions with the environments
- Claude Doussan (INRA, France)
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Soil-Root Interactions: Observations and modeling with a specific focus on water uptake
- Yves Dumont (CIRAD, France)
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Modelling Root Growth with PDE, The C-root model
- Ansgar Bohmann (Heidelberg University, Germany)
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Coupling biochemical models to physics of transport in leaf physiology
A. Chavarria-Krauser, M. Ptashnyk
- Mariya Ptashnyk (RWTH Aachen University, Germany)
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Transport of metal and water in plant roots: Modelling and Analysis
- Wilfried Konrad (University of Tuebingen, German)
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Dynamics of plant water transport derived from applying an optimisation scheme to Soil-Plant-Atmosphere-Continuum
- Anita Roth-Nebelsick (State Museum of Natural History Stuttgart, Germany)
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Plant gas exchange: Theoretical considerations on the level of single stomata
- Roland Pieruschka (Forschungszentrum Juelich, Germany)
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The interaction of leaves with the environment
- Konstantinos Zygalakis (University of Oxford, UK)
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A dual porosity model for the uptake of nutrients by root hairs
- Vitaly Volpert (CNRS, University Lyon 1, France)
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Nonlinear dynamics of plant growth
- Leah Band (University of Nottingham, UK)
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Modelling hormone-regulated plant root growth
- Rosemary Dyson (University of Birmingham, UK)
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The mechanics of plant root growth
- Robert Nolet (VU University Amsterdam, Netherlands)
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Existence of solutions for the diffusive VSC model
- Andres Chavarria-Krauser (University of Heidelberg, Germany)
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A model of plasma membrane flow and cytosis regulation in growing pollen tubes
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